Validation of L. pneumophila sequence-based typing tool - SRA

SRX19407761: Validation of L. pneumophila sequence-based typing tool
1 ILLUMINA (Illumina MiSeq) run: 4.4M spots, 1.9G bases, 997.6Mb downloads

Design: Pair-end Illumina sequencing using the MiSeq

Submitted by: Pneumonia Response and Surveillance Laboratory (CDC) (cdc-rdb-prs)

Study: Validation of updated sequence based typing tool for Legionella pneumophila

Isolates within this bioproject were used to compare and validate an updated sequence-based typing tool for Legionella pneumphila

Sample: ST36

Library:

Name: D7360

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 4.4M spots, 1.9G bases, 997.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR23514598	4,440,133	1.9G	997.6Mb	2024-03-01

Supplemental Content

SAMN05180037 (1)
SRA
mKIAA1398 protein, partial [Mus musculus]
mKIAA1398 protein, partial [Mus musculus]
gi|37360362|dbj|BAC98159.1|

Protein
Parvoscincus decipiens voucher KU 326594 NADH dehydrogenase subunit 2 (ND2) gene...
Parvoscincus decipiens voucher KU 326594 NADH dehydrogenase subunit 2 (ND2) gene, partial cds; mitochondrial
gi|565983482|gb|KF425426.1|

Nucleotide
cytochrome b, partial (mitochondrion) [Poecile weigoldicus]
cytochrome b, partial (mitochondrion) [Poecile weigoldicus]
gi|17530137|gb|AAL40714.1|

Protein
LOC127894067 [Homo sapiens]
LOC127894067 [Homo sapiens]
Gene ID:127894067

Gene

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SRA